Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| guanosine-5'-triphosphate,3'-diphosphate diphosphatase | D0N37_RS00525 | Not Available | Positive | 107456 - 108964 | 55366.5 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 109472 - 111004 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 111278 - 114159 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 114351 - 114464 | Not Available |
| integrase core domain-containing protein | D0N37_RS00545 | Not Available | Negative | 114656 - 115693 | 39781.5 |
| tonb-dependent receptor plug domain-containing protein | D0N37_RS00550 | Not Available | Positive | 116526 - 119417 | 104733.0 |
| arac family transcriptional regulator | D0N37_RS00555 | Not Available | Negative | 119549 - 120394 | 32431.0 |
| mfs transporter | D0N37_RS00560 | Not Available | Positive | 120442 - 121614 | 43376.1 |
| xre family transcriptional regulator | D0N37_RS00565 | Not Available | Negative | 121649 - 122302 | 24429.2 |
| glycosyl hydrolase family 18 protein | D0N37_RS00570 | Not Available | Positive | 122581 - 123993 | 50851.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.