Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | D0N37_RS00470 | Not Available | Positive | 92948 - 95533 | 97351.5 |
| tetratricopeptide repeat protein | D0N37_RS00475 | Not Available | Negative | 95530 - 96300 | 29022.6 |
| m20/m25/m40 family metallo-hydrolase | D0N37_RS00480 | Not Available | Negative | 96390 - 97784 | 50097.3 |
| atp-dependent rna helicase dbpa | D0N37_RS00485 | Not Available | Positive | 97977 - 99359 | 51295.5 |
| dna-j related domain-containing protein | D0N37_RS00490 | Not Available | Negative | 99348 - 99932 | 23244.5 |
| response regulator | D0N37_RS00495 | Not Available | Positive | 100004 - 102799 | 105300.0 |
| methyl-accepting chemotaxis protein | D0N37_RS00500 | Not Available | Negative | 102840 - 104102 | 45948.1 |
| transcription termination factor rho | D0N37_RS00505 | Not Available | Negative | 104240 - 105499 | 47083.1 |
| thioredoxin trxa | D0N37_RS00515 | Not Available | Negative | 105705 - 106031 | 11785.2 |
| atp-dependent rna helicase rhlb | D0N37_RS00520 | Not Available | Positive | 106123 - 107403 | 48105.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.