Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prnb family protein | D0N37_RS00235 | Not Available | Positive | 48064 - 49251 | 44663.9 |
| aminotransferase class v-fold plp-dependent enzyme | D0N37_RS00240 | Not Available | Positive | 49238 - 50350 | 41685.3 |
| mbl fold metallo-hydrolase | D0N37_RS00245 | Not Available | Negative | 50347 - 51096 | 28169.6 |
| Trna-ser | Not Available | Not Available | Positive | 51224 - 51316 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 51335 - 51425 | Not Available |
| hypothetical protein | D0N37_RS24370 | Not Available | Negative | 51650 - 51796 | 5519.71 |
| hypothetical protein | D0N37_RS24540 | Not Available | Positive | 52082 - 52285 | 7015.55 |
| diacylglycerol/lipid kinase family protein | D0N37_RS00260 | Not Available | Positive | 52276 - 52923 | 23863.1 |
| dmt family transporter | D0N37_RS00265 | Not Available | Negative | 52965 - 53879 | 34231.4 |
| plp-dependent aminotransferase family protein | D0N37_RS00270 | Not Available | Positive | 53995 - 55437 | 53027.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.