Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-dependent coproporphyrinogen oxidase | D0N37_RS00130 | Not Available | Positive | 29351 - 30262 | 34547.6 |
| methyl-accepting chemotaxis protein | D0N37_RS00135 | Not Available | Negative | 30309 - 31916 | 58732.4 |
| group ii truncated hemoglobin | D0N37_RS00140 | Not Available | Negative | 32022 - 32471 | 17266.9 |
| shikimate dehydrogenase | D0N37_RS00145 | Not Available | Positive | 32499 - 33311 | 28985.2 |
| duf1488 family protein | D0N37_RS00150 | Not Available | Positive | 33314 - 33547 | 8702.2 |
| gamma carbonic anhydrase family protein | D0N37_RS00155 | Not Available | Negative | 33533 - 34063 | 19083.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 34651 - 36182 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 36456 - 39337 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 39529 - 39642 | Not Available |
| integrase core domain-containing protein | D0N37_RS24365 | Not Available | Negative | 39942 - 40157 | 8382.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.