Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp245 | D0N37_RS13505 | Not Available | Positive | 2886521 - 2888185 | 62628.3 |
| pilz domain-containing protein | D0N37_RS13510 | Not Available | Positive | 2888413 - 2888778 | 13833.3 |
| Hypothetical protein | D0N37_RS13515 | Not Available | Positive | 2888823 - 2889227 | 14492.1 |
| Hypothetical protein | D0N37_RS13520 | Not Available | Positive | 2889237 - 2889833 | 21508.1 |
| Glutathionylspermidine synthase | D0N37_RS13525 | Not Available | Positive | 2889947 - 2891116 | 45666.2 |
| chromosomal replication initiator protein dnaa | D0N37_RS00005 | Not Available | Positive | 13 - 1413 | 52790.9 |
| dna polymerase iii subunit beta | D0N37_RS00010 | Not Available | Positive | 1426 - 2529 | 41148.3 |
| dna replication/repair protein recf | D0N37_RS00015 | Not Available | Positive | 2534 - 3622 | 41159.9 |
| dna topoisomerase (atp-hydrolyzing) subunit b | D0N37_RS00020 | Not Available | Positive | 3635 - 6052 | 90244.0 |
| glycine--trna ligase subunit alpha | D0N37_RS00025 | Not Available | Positive | 6228 - 7130 | 34188.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.