Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas piscicida |
| Strain | DE1-A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Delaware Bay; Hainan Island; mariculture water; Marine |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas piscicida strain DE1-A chromosome 1, complete
Gene Summary
Adenine Count
1174966 bp
Thymine Count
1179793 bp
Guanine Count
903423 bp
Cytosine Count
907796 bp
Genome Length
4165978 bp
Protein-coding Genes
3589 genes
Non-Coding Genes
211 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | D0N37_RS04345 | Not Available | Negative | 930771 - 932453 | 60182.5 |
| iron-sulfur cluster insertion protein erpa | D0N37_RS04350 | Not Available | Positive | 932783 - 933121 | 12128.3 |
| helix-turn-helix domain-containing protein | D0N37_RS04355 | Not Available | Positive | 933858 - 934100 | 9303.22 |
| ampg family muropeptide mfs transporter | D0N37_RS04360 | Not Available | Negative | 934145 - 935530 | 51044.9 |
| peptidylprolyl isomerase | D0N37_RS04365 | Not Available | Negative | 935540 - 936157 | 23336.9 |
| yajg family lipoprotein | D0N37_RS04370 | Not Available | Negative | 936157 - 936714 | 20412.4 |
| integrase core domain-containing protein | D0N37_RS04375 | Not Available | Negative | 936719 - 937848 | 40859.8 |
| alpha-ketoglutarate-dependent dioxygenase alkb family protein | D0N37_RS04380 | Not Available | Positive | 937887 - 938480 | 22224.6 |
| bola family protein | D0N37_RS04385 | Not Available | Positive | 938526 - 938840 | 11913.1 |
| integrase core domain-containing protein | D0N37_RS04390 | Not Available | Positive | 938946 - 940135 | 42861.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.