Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Pseudoalteromonadaceae
Genus
Pseudoalteromonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Pseudoalteromonadaceae |
| Genus | Pseudoalteromonas |
| Species | Pseudoalteromonas rubra |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Marine; marine sponge |
| Biotic relationship | Not Available |
| Host(s) | Mycale grandis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudoalteromonas rubra strain S4059 chromosome 2, complete
Gene Summary
Adenine Count
365401 bp
Thymine Count
350110 bp
Guanine Count
295483 bp
Cytosine Count
337125 bp
Genome Length
1348119 bp
Protein-coding Genes
959 genes
Non-Coding Genes
1 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal and hdod domain-containing protein | CWC22_RS19705 | Not Available | Negative | 26669 - 27886 | 46340.6 |
| glycogen synthase | CWC22_RS19710 | Not Available | Negative | 28044 - 29585 | 57495.6 |
| glucose-1-phosphate adenylyltransferase | CWC22_RS19715 | Not Available | Negative | 29596 - 30894 | 48861.1 |
| glycogen/starch/alpha-glucan phosphorylase | CWC22_RS19720 | Not Available | Negative | 30927 - 33410 | 94084.9 |
| glycogen debranching protein glgx | CWC22_RS19725 | Not Available | Negative | 33403 - 35502 | 79158.1 |
| 1,4-alpha-glucan branching protein glgb | CWC22_RS19730 | Not Available | Negative | 35496 - 37730 | 83787.4 |
| 4-alpha-glucanotransferase | CWC22_RS19735 | Not Available | Negative | 37727 - 39709 | 74502.3 |
| isoamylase early set domain-containing protein | CWC22_RS19740 | Not Available | Negative | 39714 - 40016 | 11842.0 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CWC22_RS19745 | Not Available | Positive | 40482 - 42395 | 71386.6 |
| lrp/asnc family transcriptional regulator | CWC22_RS19750 | Not Available | Negative | 42411 - 42839 | 15973.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.