Rippkaea orientalis PCC 8801

Gram-negativeCocciNon-motileFacultative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Chroococcales

Family

Aphanothecaceae

Genus

Rippkaea

Description

Rippkaea orientalis PCC 8801 is a Gram-negative, coccoid-shaped bacterium that occurs as single cells and exhibits facultative anaerobic growth. This aquatic microbe is part of the diverse community of microorganisms found in freshwater environments, where it likely plays a role in nutrient cycling and interactions with other microbial species. Its ability to thrive in both the presence and absence of oxygen suggests a versatile metabolic capacity that may enable it to adapt to varying environmental conditions. Rippkaea orientalis PCC 8801's coccoid morphology and solitary arrangement may influence its interactions with surrounding microorganisms, potentially affecting its nutrient uptake and competitive strategies in the aquatic habitat. The organism's facultative nature is particularly noteworthy, as it may utilize different metabolic pathways depending on the availability of oxygen, thus enhancing its ecological fitness. Overall, the traits of Rippkaea orientalis PCC 8801 suggest that it occupies a specialized niche within aquatic ecosystems, contributing to the complexity and functionality of microbial communities in these environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderChroococcales
FamilyAphanothecaceae
GenusRippkaea
SpeciesRippkaea orientalis
StrainPCC 8801

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Rippkaea orientalis PCC 8801
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rippkaea orientalis PCC 8801 plasmid pP880101, complete sequence.

Gene Summary

Adenine Count

15941 bp

Thymine Count

15179 bp

Guanine Count

10012 bp

Cytosine Count

9762 bp

Genome Length

50894 bp

Protein-coding Genes

61 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinPCC8801_RS21710Not AvailablePositive142 - 50113406.9
hypothetical proteinPCC8801_RS21715Not AvailablePositive521 - 89212954.1
hypothetical proteinPCC8801_RS21720Not AvailablePositive1253 - 163614166.8
hypothetical proteinPCC8801_RS21725Not AvailablePositive1660 - 273640259.5
caspase family proteinPCC8801_RS21730Not AvailablePositive2889 - 527688032.5
sigma-70 family rna polymerase sigma factorPCC8801_RS21735Not AvailablePositive5346 - 653946279.6
duf1822 family proteinPCC8801_RS21740Not AvailablePositive6545 - 772045370.9
transposasePCC8801_RS23985Not AvailableNegative7916 - 826013853.3
hypothetical proteinPCC8801_RS23990Not AvailableNegative8341 - 880217585.6
hypothetical proteinPCC8801_RS21755Not AvailablePositive8862 - 926315453.2

Displaying genes 1 – 10 of 61 in total

Metabolites

259 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm00012442-succinylbenzoateC11H8O5Chemical structure of 2-succinylbenzoate27415-09-04
Average220.181Da
Monoisotopic220.038270517Da

Displaying 1–10 of 259 metabolites

Health Effects

No health effects information available for this bacterium.