Bifidobacterium sp.

RodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Taxonomy

Kingdom	Bacillati
Phylum	Actinomycetota
Class	Actinomycetes
Order	Bifidobacteriales
Family	Bifidobacteriaceae
Genus	Bifidobacterium
Species	Bifidobacterium sp.
Strain	No strain

Profile

Physiology
Gram staining properties	Not Available
Shape	Rod
Mobility	Not Available
Flagellar presence	Yes
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Anaerobe
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	gastrointestinal tract; heart
Biotic relationship	Not Available
Host(s)	Homo sapiens, Apis mellifera
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

MAG TPA_asm: Bifidobacterium sp. isolate UBA8278 contig_543, whole

DPDO00000000.1

Gene Summary

Adenine Count

446210 bp

Thymine Count

449056 bp

Guanine Count

655673 bp

Cytosine Count

660422 bp

Genome Length

2232033 bp

Protein-coding Genes

1812 genes

Non-Coding Genes

95 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
Hypothetical protein	DER28_01600	Not Available	Negative	371103 - 371501	14366.8
Head-to-tail adaptor	DER28_01605	Not Available	Negative	371498 - 372013	18100.4
hypothetical protein	DER28_01610	Not Available	Negative	372028 - 372378	11335.6
Major capsid protein	DER28_01615	Not Available	Negative	372385 - 373587	42665.3
Prohead protease	DER28_01620	Not Available	Negative	373584 - 374354	27655.1
Portal protein	DER28_01625	Not Available	Negative	374351 - 375634	47147.0
hypothetical protein	DER28_01630	Not Available	Positive	377048 - 377218	5781.08
Hypothetical protein	DER28_01635	Not Available	Negative	377279 - 377617	11980.5
hypothetical protein	DER28_01640	Not Available	Negative	377714 - 377968	9411.24
Hnh endonuclease	DER28_01645	Not Available	Negative	377983 - 378291	11539.7

Displaying genes 11 – 20 of 1907 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0040476	Penicillium echinulatum	Not available	Not available	Not available
BASm0040485	Lachnoanaerobaculum sp. ICM7	Not available	Not available	Not available
BASm0040579	Bifidobacterium sp.	Not available	Not available	Not available
BASm0040593	Fusobacterium periodonticum	Not available	Not available	Not available
BASm0040676	Bacillus amyloliquefaciens FZB42	Not available	Not available	Not available
BASm0040685	Methylobacter tundripaludum	Not available	Not available	Not available
BASm0040694	Pseudomonas monteilii	Not available	Not available	Not available
BASm0040713	Mobiluncus mulieris	Not available	Not available	Not available
BASm0040743	Parabacteroides sp.	Not available	Not available	Not available
BASm0040751	Mycolicibacterium phlei	Not available	Not available	Not available

Displaying 1–10 of 12 metabolites

Health Effects

No health effects information available for this bacterium.