Agathobacter rectalis str. R22

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Agathobacter

Description

Agathobacter rectalis strain R22 is a Gram-positive, nonsporulating, rod-shaped bacterium that thrives optimally at 37.0°C and exhibits anaerobic metabolic characteristics as a chemoheterotroph. This organism is capable of utilizing a variety of organic compounds for energy, reflecting its adaptability to diverse habitats. Its anaerobic nature suggests that it plays a significant role in environments where oxygen is limited, potentially contributing to the fermentation processes within those ecosystems. The ability of A. rectalis str. R22 to survive and metabolize in anaerobic conditions may implicate it in various ecological niches, including the gastrointestinal tract of mammals, where similar anaerobic conditions prevail. This bacterium's metabolic versatility could also suggest its involvement in biogeochemical cycles, particularly in the degradation of complex organic materials in sedimentary environments. Further studies could elucidate the specific contributions of A. rectalis str. R22 to microbial community dynamics and its potential interactions with other microbial taxa in its habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAgathobacter
SpeciesAgathobacter rectalis
StrainR22

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Agathobacter rectalis str. R22
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Agathobacter rectalis strain R22 contig110, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
molecular chaperone hsp70LD38_01240Not AvailableNegative231805 - 23280936757.9
dna repair protein radcLD38_01245Not AvailableNegative232833 - 23352225462.8
hypothetical proteinLD38_01250Not AvailableNegative233593 - 23489146987.4
trna delta(2)-isopentenylpyrophosphate transferaseLD38_01255Not AvailableNegative234885 - 23583836636.0
dna mismatch repair protein mutlLD38_01260Not AvailableNegative235868 - 23781473315.3
dna mismatch repair protein mutsLD38_01265Not AvailableNegative237826 - 24045099312.8
fad-dependent oxidoreductaseLD38_01270Not AvailableNegative240499 - 24211259203.9
flavoprotein, yhin familyLD38_01275Not AvailableNegative242113 - 24333043824.9
hypothetical proteinLD38_01280Not AvailableNegative243361 - 24373514035.5
stage v sporulation protein bLD38_01285Not AvailableNegative243785 - 24544960405.4

Displaying genes 231 – 240 of 3028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.