Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter rectalis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Agathobacter rectalis strain TM10-3 TM10-3.Scaf54, whole genome
Gene Summary
Adenine Count
866774 bp
Thymine Count
854171 bp
Guanine Count
617615 bp
Cytosine Count
606812 bp
Genome Length
2945641 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
11
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium ion-translocating decarboxylase subunit beta | DXD95_00140 | Not Available | Positive | 34344 - 35492 | 40223.7 |
| oxaloacetate decarboxylase subunit alpha | DXD95_00145 | Not Available | Positive | 35515 - 36933 | 52721.5 |
| murr/rpir family transcriptional regulator | DXD95_00150 | Not Available | Positive | 37175 - 38104 | 34781.7 |
| nad(p)/fad-dependent oxidoreductase | DXD95_00155 | Not Available | Positive | 38097 - 39380 | 46765.7 |
| (d)cmp kinase | DXD95_00160 | Not Available | Positive | 39495 - 40157 | 24484.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DXD95_00165 | Not Available | Positive | 40161 - 41021 | 32135.2 |
| 30s ribosomal protein s1 | DXD95_00170 | Not Available | Positive | 41002 - 42117 | 41187.0 |
| elongation subunit of dna-dependent dna polymerase | DXD95_00175 | Not Available | Negative | 42214 - 43311 | 42526.8 |
| electron transport complex subunit rsxc | DXD95_00180 | Not Available | Positive | 43477 - 44808 | 48169.5 |
| rnfabcdge type electron transport complex subunit d | DXD95_00185 | Not Available | Positive | 44827 - 45789 | 34335.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

