Dorea formicigenerans

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans is a Gram-positive, rod-shaped microbe that thrives in mesophilic temperatures, categorizing it as a chemoheterotroph, and can be found in various body sites of humans and animals, including the gastrointestinal tract, skin, and respiratory system. As an obligate anaerobe, Dorea formicigenerans requires the absence of oxygen to grow and survive, which is reflected in its optimal growth conditions. The Gram-positive characteristic of Dorea formicigenerans indicates that it has a thick peptidoglycan layer in its cell wall, providing it with a robust structure. Its rod shape allows it to maintain a large surface area, facilitating the exchange of nutrients and waste products. As a chemoheterotroph, Dorea formicigenerans relies on organic compounds for energy and carbon, which it obtains from its surroundings. This microbe can be found in a wide range of body sites, from the oral cavity to the gut, and even in the environment, such as in soil and water. The inability of Dorea formicigenerans to survive in the presence of oxygen makes it well adapted to environments with low oxygen levels, such as the human gut. Dorea formicigenerans plays a significant role in the fermentation of complex carbohydrates and production of short-chain fatty acids, which are essential for maintaining a healthy gut microbiome, and its unique metabolic capabilities allow it to contribute to the degradation of various organic compounds, making it a key player in the ecosystem.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3131 genes

Non-Coding Genes

157 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction resolvase recuDXD10_00170Not AvailableNegative29353 - 2989221265.4
rlua family pseudouridine synthaseDXD10_00175Not AvailableNegative29850 - 3085738111.3
hypothetical proteinDXD10_00180Not AvailableNegative30861 - 3143921595.7
sdr family nad(p)-dependent oxidoreductaseDXD10_00185Not AvailableNegative31449 - 3221027677.9
ygiq family radical sam proteinDXD10_00190Not AvailableNegative32258 - 3415972174.2
rrna pseudouridine synthaseDXD10_00195Not AvailableNegative34183 - 3489927137.8
23s ribosomal rnaNot AvailableNot AvailablePositive35981 - 38872Not Available
sam-dependent methyltransferaseDXD10_00200Not AvailableNegative34896 - 3628152478.3
m23 family peptidaseDXD10_00205Not AvailableNegative36345 - 3709128579.2
aminoacyl-histidine dipeptidaseDXD10_00210Not AvailableNegative37249 - 3869452760.2

Displaying genes 81 – 90 of 11879 in total

Metabolites

1 record
Metabolite IDMetabolite nameStructureCAS number
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da

Displaying 1–1 of 1 metabolites

Health Effects

No health effects information available for this bacterium.