Nocardia farcinica

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Nocardia

Description

Nocardia farcinica is a Gram-positive bacterium characterized by its filamentous arrangement of cocci and its classification as a chemoheterotroph. This species thrives in aerobic conditions and is optimally active at a temperature of 37.0°C, which is consistent with its adaptation to environments that may mimic mammalian body temperatures. Nocardia farcinica is nonsporulating, indicating it does not form spores as a means of survival, which may reflect its ecological niche within soil habitats where it can exploit organic matter for energy. As an inhabitant of the soil, Nocardia farcinica plays a role in the decomposition of organic materials, contributing to nutrient cycling in terrestrial ecosystems. Its filamentous structure may enhance its ability to penetrate and colonize various substrates, facilitating its survival and metabolic activities in complex soil environments. The ecological dynamics of Nocardia farcinica, particularly its interactions with other soil microorganisms and its potential role in biogeochemical processes, remain areas of interest for further research, highlighting the significance of this organism in soil microbiology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusNocardia
SpeciesNocardia farcinica
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Nocardia farcinica
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipFree living
Host(s)Homo sapiens, Bos taurus
Cell arrangementFilaments
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityHuman

Genome Summary

Nocardia farcinica strain NCTC11134 plasmid 5, complete sequence.

Gene Summary

Adenine Count

6171 bp

Thymine Count

6318 bp

Guanine Count

14590 bp

Cytosine Count

14212 bp

Genome Length

41291 bp

Protein-coding Genes

45 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinAMO33_RS31990Not AvailablePositive18201 - 1897728592.3
tyrosine-type recombinase/integraseAMO33_RS29950Not AvailablePositive19157 - 2008934193.1
3'-5' exonucleaseAMO33_RS31995Not AvailableNegative20217 - 2074719393.2
duf5994 family proteinAMO33_RS29955Not AvailableNegative20872 - 2135117415.4
duf5994 family proteinAMO33_RS32215Not AvailableNegative21348 - 2195021745.0
phosphatidylinositol mannoside acyltransferaseAMO33_RS29965A0QWG5Positive22304 - 2321233144.9
duf5994 family proteinAMO33_RS32000Not AvailablePositive23397 - 2385816893.1
hypothetical proteinAMO33_RS29975Not AvailableNegative24221 - 2474518744.2
hypothetical proteinAMO33_RS29985Not AvailablePositive25506 - 2587113868.4
hypothetical proteinAMO33_RS29990Not AvailableNegative25958 - 261738285.62

Displaying genes 21 – 30 of 6195 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Disseminated nocardiosisCausesPMC9112502
NocardiosisCausesPMC9850167
Disseminated life-threatening infectionsCausesPMC11994016
Disseminated infectionsCausesPMC11994016
Central nervous system infectionCausesPMC11994016
Brain abscessCausesPMC11994016
Disseminated infectionCausesPMC11994016
Severe pneumoniaCausesPMC11994016
BacteremiaCausesPMC12139244
Localized or disseminated purulent or granulomatous lesionsCausesPMC12419247

Displaying health effects 1 – 10 of 15 in total