Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia farcinica |
| Strain | TRH1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus |
| Cell arrangement | Filaments |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
836799 bp
Thymine Count
839374 bp
Guanine Count
1772625 bp
Cytosine Count
1781215 bp
Genome Length
5230013 bp
Protein-coding Genes
4323 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 18 - 3156 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 65 - 181 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 138 - 254 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 186 - 302 | Not Available |
| 4-hydroxy-tetrahydrodipicolinate synthase | A8M60_00005 | Not Available | Negative | 159 - 1064 | 31756.6 |
| fad-dependent thymidylate synthase | A8M60_00010 | Not Available | Negative | 1103 - 1855 | 27577.7 |
| alkaline phosphatase | A8M60_00015 | Not Available | Positive | 2000 - 3658 | 59948.5 |
| had family hydrolase | A8M60_00020 | Not Available | Negative | 3655 - 4434 | 28379.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 5159 - 5573 | Not Available |
| hypothetical protein | A8M60_00025 | Not Available | Negative | 4497 - 5726 | 45811.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Disseminated nocardiosis | Causes | PMC9112502 |
| Nocardiosis | Causes | PMC9850167 |
| Disseminated life-threatening infections | Causes | PMC11994016 |
| Disseminated infections | Causes | PMC11994016 |
| Central nervous system infection | Causes | PMC11994016 |
| Brain abscess | Causes | PMC11994016 |
| Disseminated infection | Causes | PMC11994016 |
| Severe pneumonia | Causes | PMC11994016 |
| Bacteremia | Causes | PMC12139244 |
| Localized or disseminated purulent or granulomatous lesions | Causes | PMC12419247 |

