Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide/dipeptide abc transporter | ALP84_04163 | Not Available | Negative | 67749 - 68717 | 34670.5 |
| dipeptide abc transporter permease | ALP84_04164 | Not Available | Negative | 68728 - 69639 | 32682.9 |
| urea amidolyase-related protein | ALP84_04949 | Not Available | Negative | 76961 - 78021 | 38225.8 |
| hypothetical protein | ALP84_03182 | Not Available | Negative | 78022 - 78636 | 22446.7 |
| abc transporter, atp-binding protein | ALP84_03183 | Not Available | Negative | 79389 - 80153 | 27906.9 |
| abc transporter, permease protein | ALP84_03184 | Not Available | Negative | 80150 - 80965 | 29849.9 |
| abc transporter, periplasmic substrate-binding protein | ALP84_03185 | Not Available | Negative | 80993 - 82066 | 38057.3 |
| hypothetical protein | ALP84_03186 | Not Available | Positive | 82629 - 83054 | 16757.3 |
| transcriptional regulator | ALP84_04494 | Not Available | Negative | 83086 - 84024 | 35114.2 |
| tartrate dehydrogenase / tartrate decarboxylase / d-malic enzyme | ALP84_100298 | Not Available | Positive | 84126 - 85193 | 38587.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
