Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding region of abc-type glycine betaine transport system | ALP84_04154 | Not Available | Positive | 55186 - 56079 | 33150.6 |
| binding-protein dependent transport system inner membrane protein | ALP84_04155 | Not Available | Positive | 56093 - 56746 | 22897.3 |
| l-proline/glycine/betaine abc transport atp-binding protein | ALP84_100256 | Not Available | Positive | 56743 - 57912 | 43296.0 |
| hypothetical protein | ALP84_04156 | Not Available | Negative | 58028 - 58684 | 24796.6 |
| diaminopimelate decarboxylase | ALP84_04157 | Not Available | Positive | 59233 - 60411 | 43970.6 |
| hypothetical protein | ALP84_04158 | Not Available | Negative | 60484 - 61302 | 31313.9 |
| hypothetical protein | ALP84_04159 | Not Available | Negative | 61382 - 62386 | 37555.1 |
| hypothetical protein | ALP84_04160 | Not Available | Negative | 62389 - 63636 | 46485.7 |
| sulfite reductase flavoprotein, alpha-component | ALP84_04161 | Not Available | Positive | 64054 - 66579 | 92563.0 |
| dppf protein | ALP84_05179 | Not Available | Negative | 66775 - 67782 | 36892.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
