Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyisobutyrate dehydrogenase | ALP84_04145 | Not Available | Positive | 42095 - 42982 | 30697.4 |
| putative tonb-dependent siderophore receptor | ALP84_04146 | Not Available | Positive | 43498 - 45474 | 73198.8 |
| sensor histidine kinase | ALP84_05177 | Not Available | Negative | 45778 - 47193 | 52473.0 |
| dna-binding response regulator | ALP84_04148 | Not Available | Negative | 47513 - 47884 | 13858.8 |
| gamma-glutamyltranspeptidase | ALP84_04149 | Not Available | Positive | 48124 - 49851 | 61423.5 |
| hypothetical protein | ALP84_04150 | Not Available | Positive | 49922 - 50686 | 26387.5 |
| putative proteinh quinone dehydrogenase mdab | ALP84_04151 | Not Available | Positive | 50798 - 51442 | 24112.5 |
| lysr family transcriptional regulator | ALP84_04152 | Not Available | Positive | 51523 - 52422 | 33549.2 |
| peptide chain release factor 3 | ALP84_04153 | Not Available | Negative | 52529 - 54112 | 59722.5 |
| glycine betaine/carnitine/choline abc transporter | ALP84_100037 | Not Available | Positive | 54457 - 55170 | 24785.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
