Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l32 | ALP84_00144 | Not Available | Negative | 634478 - 634660 | 6756.95 |
| hypothetical protein | ALP84_00145 | Not Available | Negative | 634673 - 635200 | 19319.1 |
| maf-like protein | ALP84_00146 | Not Available | Positive | 635307 - 635885 | 21018.1 |
| signal peptide peptidase sppa, 36k type | ALP84_00147 | Not Available | Negative | 635938 - 636939 | 36614.6 |
| putative phosphatase | ALP84_100644 | Not Available | Negative | 636965 - 637384 | 15468.5 |
| pseudouridine synthase | ALP84_00148 | Not Available | Negative | 637617 - 638573 | 35383.3 |
| ribonuclease e | ALP84_100760 | Not Available | Positive | 639299 - 642433 | 115418.0 |
| udp-n-acetylenolpyruvoylglucosamine reductase | ALP84_00149 | Not Available | Negative | 642527 - 643546 | 37199.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | ALP84_00150 | Not Available | Negative | 643581 - 644345 | 27521.8 |
| hypothetical protein | ALP84_00151 | Not Available | Negative | 644342 - 644527 | 6612.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
