Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phca | ALP84_00171 | Not Available | Positive | 24906 - 26459 | 58049.1 |
| peptide abc transporter, periplasmic peptide-binding protein | ALP84_00172 | Not Available | Positive | 26556 - 28157 | 59501.7 |
| abc-type dipeptide transport system, periplasmic component | ALP84_00173 | Not Available | Positive | 28422 - 30044 | 60063.4 |
| extracellular solute-binding protein | ALP84_00174 | Not Available | Positive | 30311 - 31909 | 59544.7 |
| oprd family outer membrane protein | ALP84_00175 | Not Available | Positive | 31965 - 33446 | 54427.2 |
| dipeptide abc transporter, periplasmic dipeptide-binding protein | ALP84_00176 | Not Available | Positive | 33532 - 35127 | 59167.6 |
| hypothetical protein | ALP84_04335 | Not Available | Positive | 35198 - 35342 | 5468.01 |
| pyoverdine sidechain peptide synthetase iii, l-thr-l-ser component | ALP84_04481 | Not Available | Negative | 35569 - 37480 | 71579.5 |
| recb protein | ALP84_04143 | Not Available | Positive | 38431 - 39232 | 30197.6 |
| exodeoxyribonuclease v, alpha subunit | ALP84_04144 | Not Available | Positive | 39229 - 41313 | 76161.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
