Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane efflux protein | ALP84_03395 | Not Available | Positive | 5798909 - 5800300 | 50668.7 |
| tat pathway signal sequence domain-containing protein | ALP84_05005 | Not Available | Negative | 5800403 - 5802112 | 64861.5 |
| renal dipeptidase protein | ALP84_03397 | Not Available | Positive | 5802224 - 5803573 | 49796.6 |
| aminotransferase, s v | ALP84_03398 | Not Available | Positive | 5803616 - 5804896 | 47725.0 |
| hypothetical protein | ALP84_03399 | Not Available | Positive | 5804938 - 5805798 | 31266.6 |
| pyoverdine abc transporter, atp-binding/permease protein | ALP84_03400 | Not Available | Positive | 5805841 - 5807505 | 61617.1 |
| hypothetical protein | ALP84_05008 | Not Available | Positive | 5807777 - 5810251 | 89896.3 |
| putative ton-b dependent siderophore receptor | ALP84_03401 | Not Available | Positive | 5810477 - 5812888 | 88636.7 |
| hypothetical protein | ALP84_05013 | Not Available | Negative | 5812952 - 5818036 | 186490.0 |
| putative gas vesicle protein | ALP84_01235 | Not Available | Positive | 5818288 - 5818755 | 17173.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
