Pseudomonas cichorii

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas cichorii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas cichorii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Viridiplantae, Solanum lycopersicum, Geranium
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas cichorii strain ICMP 6917 PchICMP6917_Contig_42, whole

Gene Summary

Adenine Count

1231590 bp

Thymine Count

1249161 bp

Guanine Count

1730550 bp

Cytosine Count

1707381 bp

Genome Length

5933389 bp

Protein-coding Genes

4733 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinALP84_200023Not AvailablePositive510268 - 5104807521.79
hypothetical proteinALP84_200071Not AvailablePositive510594 - 51146632176.3
hypothetical proteinALP84_200040Not AvailablePositive511551 - 51191613823.6
hypothetical proteinALP84_200092Not AvailablePositive512274 - 51313733971.7
hypothetical proteinALP84_200054Not AvailablePositive513212 - 5133826312.58
hypothetical proteinALP84_200106Not AvailablePositive513856 - 51478835567.1
hypothetical proteinALP84_200062Not AvailableNegative515063 - 51543113931.9
hypothetical proteinALP84_200057Not AvailableNegative515460 - 51590916918.9
hypothetical proteinALP84_200073Not AvailablePositive516286 - 51684020468.5
hypothetical proteinALP84_200097Not AvailablePositive516782 - 5169706981.61

Displaying genes 451 – 460 of 4809 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

6 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000275keto-D-sorboseC6H12O6Chemical structure of keto-D-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0001418D-alluloseC6H12O6Chemical structure of D-allulose551-68-8
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014073D-TagatoseC6H12O6Chemical structure of D-Tagatose20197-42-6
Average180.156Da
Monoisotopic180.063388106Da
BASm0039745Atopobium parvulumNot availableNot availableNot available
BASm0039746Acinetobacter baumannii AB0057Not availableNot availableNot available
BASm0040135Rhodobacter sphaeroidesNot availableNot availableNot available

Displaying 1–6 of 6 metabolites

Health Effects

Health ConditionRelationReference
Lettuce midrib rotCausesPMC9545932
Midrib rotCausesPMC9545932

Displaying health effects 1 – 2 of 2 in total