Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate decarboxylase acyl carrier protein | ALP84_02621 | Not Available | Positive | 401635 - 401934 | 10614.7 |
| nuclease | ALP84_00420 | Not Available | Positive | 402143 - 402686 | 19399.4 |
| maeb protein | ALP84_00421 | Not Available | Positive | 402872 - 404140 | 45181.5 |
| ribosomal rna small subunit methyltransferase d | ALP84_00422 | Not Available | Negative | 404249 - 404839 | 21351.3 |
| hypothetical protein | ALP84_00423 | Not Available | Negative | 404839 - 406332 | 52628.1 |
| peptidase, m16 protein | ALP84_00424 | Not Available | Negative | 406329 - 407834 | 56098.2 |
| signal recognition particle receptor ftsy | ALP84_00425 | Not Available | Positive | 407937 - 409412 | 51850.4 |
| cell division protein ftsx | ALP84_100354 | Not Available | Positive | 410077 - 411108 | 37221.4 |
| rna polymerase sigma factor rpoh | ALP84_00426 | Not Available | Positive | 411222 - 412076 | 32584.5 |
| monofunctional biosynthetic peptidoglycan transglycosylase | ALP84_04387 | Not Available | Negative | 412176 - 413375 | 44075.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
