Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate synthase a | ALP84_00106 | Not Available | Positive | 354556 - 355653 | 40149.4 |
| peptidase m48, ste24p | ALP84_00107 | Not Available | Negative | 355724 - 357157 | 53193.6 |
| sira-like protein | ALP84_00108 | Not Available | Positive | 357306 - 357557 | 9129.03 |
| perm family membrane protein | ALP84_00109 | Not Available | Positive | 357588 - 358661 | 39560.5 |
| ahpc/tsa protein | ALP84_00110 | Not Available | Negative | 358707 - 359180 | 17349.7 |
| glycine cleavage system protein r | ALP84_04324 | Not Available | Negative | 359190 - 359753 | 20598.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ALP84_00111 | Not Available | Positive | 360080 - 360958 | 31306.0 |
| putative lipoprotein | ALP84_00112 | Not Available | Positive | 360977 - 362092 | 40312.1 |
| metallo-beta-lactamase protein | ALP84_00113 | Not Available | Positive | 362093 - 362851 | 27751.2 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | ALP84_00114 | Not Available | Positive | 362880 - 363590 | 26925.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
