Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atpase | ALP84_00067 | Not Available | Negative | 311510 - 314284 | 103707.0 |
| dna-binding domain-containing protein, arac-type | ALP84_00068 | Not Available | Negative | 314383 - 314841 | 17188.7 |
| small-conductance mechanosensitive channel | ALP84_00069 | Not Available | Negative | 315030 - 316457 | 51119.2 |
| esterase/lipase | ALP84_00070 | Not Available | Negative | 316522 - 317544 | 36465.6 |
| transcriptional regulator, lysr protein | ALP84_00071 | Not Available | Positive | 317637 - 318587 | 35177.6 |
| aliphatic sulfonate abc transporter substrate-binding protein | ALP84_04318 | Not Available | Positive | 318691 - 319740 | 37705.9 |
| s/n-oxide reductase, molybdopterin guanine dinucleotide-containing | ALP84_00073 | Not Available | Positive | 319835 - 322111 | 84141.5 |
| chemotaxis response regulator protein-glutamate methylesterase | ALP84_00074 | Not Available | Negative | 322939 - 323994 | 37928.3 |
| chemotaxis protein | ALP84_00075 | Not Available | Negative | 323991 - 324509 | 19697.5 |
| chemotaxis protein methyltransferase | ALP84_00076 | Not Available | Negative | 324500 - 325312 | 31352.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
