Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 180696 - 180781 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 180878 - 180954 | Not Available |
| ribosome maturation factor rimp | ALP84_00477 | Not Available | Positive | 181083 - 181541 | 17081.4 |
| transcription elongation factor nusa | ALP84_00478 | Not Available | Positive | 181601 - 183082 | 54453.7 |
| translation initiation factor if-2 | ALP84_00479 | Not Available | Positive | 183109 - 185664 | 91613.6 |
| ribosome-binding factor a | ALP84_00480 | Not Available | Positive | 185822 - 186238 | 15324.3 |
| trna pseudouridine synthase b | ALP84_00481 | Not Available | Positive | 186242 - 187159 | 33751.4 |
| 30s ribosomal protein s15 | ALP84_00482 | Not Available | Positive | 187310 - 187579 | 10001.2 |
| polyribonucleotide nucleotidyltransferase | ALP84_00483 | Not Available | Positive | 187752 - 189857 | 75010.4 |
| putative periplasmic or secreted lipoprotein | ALP84_00484 | Not Available | Positive | 190150 - 190500 | 11925.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
