Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas cichorii |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Viridiplantae, Solanum lycopersicum, Geranium |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1231590 bp
Thymine Count
1249161 bp
Guanine Count
1730550 bp
Cytosine Count
1707381 bp
Genome Length
5933389 bp
Protein-coding Genes
4733 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | ALP84_00451 | Not Available | Negative | 147356 - 147556 | 7749.35 |
| transposase is66 | ALP84_100725 | Not Available | Negative | 147575 - 147982 | 15911.5 |
| Tmrna,resume consensus sequence (at 427): aataaatgcctatgaaag | Not Available | Not Available | Positive | 148916 - 149484 | Not Available |
| Tmrna,resume consensus sequence (at 90): tatagttgccaatgacga | Not Available | Not Available | Positive | 149392 - 149783 | Not Available |
| hypothetical protein | ALP84_00452 | Not Available | Negative | 149899 - 150186 | 9923.84 |
| fad/fmn-dependent dehydrogenase | ALP84_00453 | Not Available | Negative | 150326 - 153136 | 102858.0 |
| hypothetical protein | ALP84_00454 | Not Available | Negative | 153133 - 153804 | 24931.8 |
| cluster-containing protein | ALP84_00455 | Not Available | Negative | 153804 - 155261 | 53986.2 |
| fe-s oxidoreductase | ALP84_00456 | Not Available | Negative | 155258 - 156082 | 30492.2 |
| l-lactate permease | ALP84_100396 | Not Available | Negative | 156180 - 157871 | 59095.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
