Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | LMG 10510 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
354308 bp
Thymine Count
368198 bp
Guanine Count
688942 bp
Cytosine Count
684666 bp
Genome Length
2096123 bp
Protein-coding Genes
1657 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid protein | BCHO_0839 | Not Available | Negative | 1191715 - 1192776 | 38056.2 |
| Capsid decoration protein | BCHO_0840 | Not Available | Negative | 1192853 - 1193359 | 18073.3 |
| hypothetical protein | BCHO_0841 | Not Available | Negative | 1193383 - 1193991 | 22099.4 |
| Capsid maturation protease | BCHO_0842 | Not Available | Negative | 1194023 - 1194874 | 31686.6 |
| Putative portal protein | BCHO_0843 | Not Available | Negative | 1195298 - 1196893 | 58579.4 |
| Terminase | BCHO_0844 | Not Available | Negative | 1196909 - 1198807 | 71338.3 |
| Hnh endonuclease | BCHO_0845 | Not Available | Negative | 1199747 - 1200076 | 12835.1 |
| Trna,type:leu,anti_codon:caa; | Not Available | Not Available | Positive | 1200304 - 1200377 | Not Available |
| Trna,type:trp,anti_codon:cca; | Not Available | Not Available | Positive | 1200379 - 1200449 | Not Available |
| hypothetical protein | BCHO_0846 | Not Available | Negative | 1200456 - 1200845 | 14498.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
