Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Bifidobacteriales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Bifidobacteriales |
| Family | Bifidobacteriaceae |
| Genus | Bifidobacterium |
| Species | Bifidobacterium choerinum |
| Strain | LMG 10510 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rumen fluid |
| Biotic relationship | Not Available |
| Host(s) | Bos taurus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
354308 bp
Thymine Count
368198 bp
Guanine Count
688942 bp
Cytosine Count
684666 bp
Genome Length
2096123 bp
Protein-coding Genes
1657 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylr-type repressor | BCHO_0560 | Not Available | Negative | 200997 - 202220 | 43541.5 |
| xylulose kinase | BCHO_0561 | Not Available | Positive | 202421 - 203956 | 52694.9 |
| beta-xylosidase | BCHO_0562 | Not Available | Negative | 204181 - 205806 | 61567.0 |
| thiamine abc transporter atp-binding protein | BCHO_0563 | Not Available | Negative | 205886 - 206800 | 33593.1 |
| sugar abc transporter permease | BCHO_0564 | Not Available | Negative | 206797 - 207861 | 39716.2 |
| sugar abc transporter substrate-binding protein | BCHO_0565 | Not Available | Negative | 207936 - 209219 | 45532.4 |
| laci family transcriptional regulator | BCHO_0566 | Not Available | Positive | 209501 - 210505 | 36623.6 |
| alpha-l-arabinofuranosidase | BCHO_0567 | Not Available | Negative | 210516 - 212201 | 61373.7 |
| beta-xylosidase | BCHO_0568 | Not Available | Negative | 212194 - 213852 | 60731.7 |
| xylose isomerase | BCHO_0569 | Not Available | Negative | 214177 - 215526 | 50408.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
