Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Variovorax paradoxus strain H095 H095_contig000380, whole genome
Gene Summary
Adenine Count
1488862 bp
Thymine Count
1502920 bp
Guanine Count
3363216 bp
Cytosine Count
3352063 bp
Genome Length
9707061 bp
Protein-coding Genes
8521 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 1661537 - 1661548 | Not Available |
| Integrase | APR51_07865 | P45198 | Positive | 1661900 - 1662862 | 37099.4 |
| hypothetical protein | APR51_07870 | Not Available | Positive | 1663077 - 1663304 | 8720.63 |
| hypothetical protein | APR51_07875 | Not Available | Positive | 1663334 - 1664221 | 33003.5 |
| O-antigen beta polymerase | APR51_07880 | Not Available | Positive | 1664234 - 1665484 | 46495.6 |
| hypothetical protein | APR51_07885 | Not Available | Positive | 1665465 - 1665971 | 17002.0 |
| Putative endolysin | APR51_07890 | Q9T1X2 | Negative | 1666045 - 1666404 | 13091.8 |
| hypothetical protein | APR51_07895 | Not Available | Negative | 1666584 - 1666988 | 14668.2 |
| hypothetical protein | APR51_07900 | Not Available | Negative | 1666985 - 1667389 | 14137.5 |
| Putative tail fiber protein | APR51_07905 | Q858F5 | Negative | 1667400 - 1670075 | 94266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.