Variovorax paradoxus

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Betaproteobacteria
Order	Burkholderiales
Family	Comamonadaceae
Genus	Variovorax
Species	Variovorax paradoxus
Strain	No strain

Profile

Physiology
Gram staining properties	Negative
Shape	rod
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	aerobic
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	mine spoil; soil
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Variovorax paradoxus strain H095 H095_contig000380, whole genome

LKTX00000000.1 LKTY00000000.1 QFPP00000000.1 LKTV00000000.1 QFOS00000000.1

Gene Summary

Adenine Count

1488862 bp

Thymine Count

1502920 bp

Guanine Count

3363216 bp

Cytosine Count

3352063 bp

Genome Length

9707061 bp

Protein-coding Genes

8521 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
Hypothetical protein	APR51_09975	Not Available	Negative	2093392 - 2094459	39932.4
Hypothetical protein	APR51_09980	Not Available	Negative	2094515 - 2095366	30639.7
Hypothetical protein	APR51_09985	Not Available	Negative	2095396 - 2095770	13237.7
hypothetical protein	APR51_09990	Not Available	Negative	2095901 - 2096194	10434.4
hypothetical protein	APR51_09995	Not Available	Negative	2096224 - 2096619	14353.2
Putative phage-type endonuclease	APR51_10000	Not Available	Negative	2096678 - 2098369	60943.5
Putative recombinase rect	APR51_10005	Not Available	Negative	2098650 - 2099510	31507.6
hypothetical protein	APR51_10010	Not Available	Negative	2099507 - 2099710	7687.88
hypothetical protein	APR51_10015	Not Available	Negative	2099707 - 2099952	8582.29
hypothetical protein	APR51_10020	Not Available	Negative	2099949 - 2100194	8593.35

Displaying genes 51 – 60 of 39511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000217	alpha-ribazoleC14H18N2O4	Not available	Average278.3037Da Monoisotopic278.126657074Da
BASm0000234	(3R)-hydroxybutanoate dimerC8H13O5	Not available	Average189.188Da Monoisotopic189.0768471Da
BASm0000237	(R)-4'-phosphopantothenateC9H18NO8P	Not available	Average299.2149Da Monoisotopic299.0770031Da
BASm0000238	(R)-3-phenyllactateC9H9O3	Not available	Average165.169Da Monoisotopic165.05571773Da
BASm0000250	2,5-didehydro-D-gluconateC6H7O7	`53736-12-2`	Average191.1156Da Monoisotopic191.019177578Da
BASm0000251	2-dehydropantoateC6H9O4	Not available	Average145.1333Da Monoisotopic145.050083776Da
BASm0000253	2-oxopent-4-enoateC5H5O3	Not available	Average113.093Da Monoisotopic113.024417601Da
BASm0000254	3-hydroxy-2-methylpropanoateC4H7O3	Not available	Average103.098Da Monoisotopic103.0400677Da
BASm0000259	3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5	Not available	Average405.556Da Monoisotopic405.264647871Da
BASm0000263	4-(hydroxymethyl)benzenesulfonateC7H7O4S	Not available	Average187.19Da Monoisotopic187.007053459Da

Displaying 1–10 of 506 metabolites

Health Effects

No health effects information available for this bacterium.