Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_04905 | Not Available | Negative | 1069502 - 1069969 | 15387.7 |
| acyl-coa dehydrogenase | C5C18_04910 | Not Available | Negative | 1070083 - 1071294 | 43146.3 |
| phoh family protein | C5C18_04915 | Not Available | Negative | 1071357 - 1072721 | 49219.1 |
| aminotransferase | C5C18_04920 | Not Available | Negative | 1072937 - 1074124 | 41500.3 |
| isoprenyl transferase | C5C18_04925 | Not Available | Negative | 1074165 - 1075037 | 32356.4 |
| hemolysin iii | C5C18_04930 | Not Available | Positive | 1075036 - 1075791 | 26766.1 |
| hypothetical protein | C5C18_04935 | Not Available | Negative | 1075798 - 1076043 | 8773.62 |
| mycothiol conjugate amidase mca | C5C18_04940 | Not Available | Negative | 1076052 - 1077044 | 35347.5 |
| duf4307 domain-containing protein | C5C18_04945 | Not Available | Positive | 1077194 - 1077658 | 16621.5 |
| transcription elongation factor grea | C5C18_04950 | Not Available | Positive | 1077802 - 1078293 | 17816.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |