Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-bisphosphatase class ii | C5C18_04855 | Not Available | Negative | 1060025 - 1060957 | 32708.2 |
| class ii fructose-bisphosphate aldolase | C5C18_04860 | Not Available | Positive | 1061210 - 1062235 | 36468.8 |
| hypothetical protein | C5C18_04865 | Not Available | Positive | 1062247 - 1062813 | 19733.9 |
| xre family transcriptional regulator | C5C18_04870 | Not Available | Positive | 1063035 - 1063331 | 10575.0 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | C5C18_04875 | Not Available | Negative | 1063867 - 1064913 | 37402.5 |
| exodeoxyribonuclease vii large subunit | C5C18_04880 | Not Available | Positive | 1065059 - 1066291 | 44463.2 |
| exodeoxyribonuclease vii small subunit | C5C18_04885 | Not Available | Positive | 1066343 - 1066582 | 8404.55 |
| duf4245 domain-containing protein | C5C18_04890 | Not Available | Positive | 1066579 - 1067223 | 23221.2 |
| carbonic anhydrase | C5C18_04895 | Not Available | Positive | 1067286 - 1067987 | 24373.2 |
| aspartate ammonia-lyase | C5C18_04900 | Not Available | Positive | 1068038 - 1069453 | 49006.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |