Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_04795 | Not Available | Negative | 1045481 - 1047337 | 67221.4 |
| hypothetical protein | C5C18_04800 | Not Available | Negative | 1048526 - 1049611 | 39152.9 |
| hypothetical protein | C5C18_04805 | Not Available | Negative | 1049650 - 1050312 | 23184.0 |
| hypothetical protein | C5C18_04810 | Not Available | Negative | 1050376 - 1051281 | 33666.0 |
| hypothetical protein | C5C18_04815 | Not Available | Positive | 1052071 - 1052340 | 9828.05 |
| hypothetical protein | C5C18_04825 | Not Available | Negative | 1053397 - 1053705 | 11449.4 |
| redox-regulated atpase ychf | C5C18_04830 | Not Available | Negative | 1053710 - 1054801 | 38830.3 |
| dna polymerase iii subunit epsilon | C5C18_04835 | Not Available | Positive | 1054938 - 1055525 | 21145.0 |
| hypothetical protein | C5C18_04845 | Not Available | Negative | 1056465 - 1058756 | 78404.6 |
| dna recombination protein rmuc | C5C18_04850 | Not Available | Positive | 1058725 - 1060059 | 47751.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |