Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_04740 | Not Available | Negative | 1034601 - 1035359 | 26873.4 |
| polyphosphate kinase 2 | C5C18_04745 | Not Available | Negative | 1035374 - 1036480 | 42166.0 |
| sdr family nad(p)-dependent oxidoreductase | C5C18_04750 | Not Available | Negative | 1036573 - 1037256 | 22976.8 |
| hypothetical protein | C5C18_04755 | Not Available | Negative | 1037324 - 1038769 | 53952.2 |
| n-acetyltransferase | C5C18_04760 | Not Available | Negative | 1039023 - 1039601 | 21751.7 |
| hypothetical protein | C5C18_04770 | Not Available | Negative | 1040473 - 1041477 | 36899.4 |
| hypothetical protein | C5C18_04775 | Not Available | Negative | 1041710 - 1043509 | 63923.0 |
| hypothetical protein | C5C18_04780 | Not Available | Negative | 1043524 - 1044426 | 32866.0 |
| hypothetical protein | C5C18_04785 | Not Available | Positive | 1044628 - 1044945 | 11842.7 |
| hypothetical protein | C5C18_04790 | Not Available | Negative | 1045155 - 1045484 | 12356.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |