Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine cleavage system protein h | C5C18_04690 | Not Available | Negative | 1020198 - 1020572 | 13101.2 |
| glycine cleavage system protein t | C5C18_04695 | Not Available | Negative | 1020574 - 1021752 | 41607.4 |
| nudix domain-containing protein | C5C18_04700 | Not Available | Positive | 1022159 - 1022836 | 25179.0 |
| quinolinate synthase | C5C18_04705 | Not Available | Positive | 1022886 - 1024175 | 45788.5 |
| l-aspartate oxidase | C5C18_04710 | Not Available | Positive | 1024177 - 1025685 | 51014.8 |
| nicotinate-nucleotide diphosphorylase (carboxylating) | C5C18_04715 | Not Available | Positive | 1025679 - 1026530 | 29435.2 |
| cysteine desulfurase | C5C18_04720 | Not Available | Positive | 1026527 - 1027633 | 37617.9 |
| mfs transporter | C5C18_04725 | Not Available | Positive | 1027666 - 1029252 | 55497.2 |
| amino acid adenylation protein | C5C18_04730 | Not Available | Positive | 1029358 - 1033296 | 137529.0 |
| peptidase m1 | C5C18_04735 | Not Available | Positive | 1033293 - 1034618 | 49033.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |