Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deferrochelatase/peroxidase efeb | C5C18_04640 | Not Available | Positive | 1005260 - 1006537 | 44405.0 |
| hypothetical protein | C5C18_04645 | Not Available | Positive | 1006673 - 1007581 | 31589.9 |
| translational gtpase typa | C5C18_04650 | Not Available | Negative | 1007673 - 1009577 | 69164.5 |
| abc transporter atp-binding protein | C5C18_04655 | Not Available | Negative | 1009729 - 1011465 | 61565.3 |
| peptide abc transporter permease | C5C18_04660 | Not Available | Negative | 1011462 - 1012430 | 34386.1 |
| abc transporter permease | C5C18_04665 | Not Available | Negative | 1012420 - 1013349 | 33765.2 |
| abc transporter substrate-binding protein | C5C18_04670 | Not Available | Negative | 1013477 - 1015096 | 57251.3 |
| cpbp family intramembrane metalloprotease domain-containing protein | C5C18_04675 | Not Available | Positive | 1015230 - 1016168 | 34395.8 |
| hypothetical protein | C5C18_04680 | Not Available | Negative | 1016198 - 1017082 | 31291.2 |
| glycine dehydrogenase (aminomethyl-transferring) | C5C18_04685 | Not Available | Negative | 1017291 - 1020197 | 102652.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |