Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3117 domain-containing protein | C5C18_04590 | Not Available | Negative | 994618 - 994791 | 5940.23 |
| hypothetical protein | C5C18_04595 | Not Available | Negative | 994879 - 996090 | 43900.3 |
| succinyl-diaminopimelate desuccinylase | C5C18_04600 | Not Available | Negative | 996087 - 997184 | 39097.1 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C5C18_04605 | Not Available | Positive | 997245 - 998225 | 34177.8 |
| citrate synthase | C5C18_04610 | Not Available | Negative | 998573 - 999958 | 51118.6 |
| succinyldiaminopimelate transaminase | C5C18_04615 | Not Available | Negative | 1000166 - 1001275 | 39372.9 |
| ferredoxin family protein | C5C18_04620 | Not Available | Negative | 1001286 - 1001606 | 11710.7 |
| mycothiol biosynthesis protein | C5C18_04625 | Not Available | Negative | 1001636 - 1002805 | 39949.4 |
| high-affinity fe2+/pb2+ permease | C5C18_04630 | Not Available | Positive | 1003018 - 1003884 | 29946.0 |
| hypothetical protein | C5C18_04635 | Not Available | Positive | 1003953 - 1005206 | 43621.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |