Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | C5C18_04490 | Not Available | Negative | 973550 - 974632 | 39853.7 |
| transcription termination factor rho | C5C18_04495 | Not Available | Negative | 974741 - 977077 | 83022.6 |
| homoserine kinase | C5C18_04500 | Not Available | Negative | 977312 - 978280 | 33600.3 |
| threonine synthase | C5C18_04505 | Not Available | Negative | 978277 - 979353 | 37328.4 |
| homoserine dehydrogenase | C5C18_04510 | Not Available | Negative | 979355 - 980698 | 46046.9 |
| diaminopimelate decarboxylase | C5C18_04515 | Not Available | Negative | 980695 - 982128 | 50497.7 |
| duf2993 domain-containing protein | C5C18_04520 | Not Available | Negative | 982323 - 983096 | 25932.1 |
| arginine--trna ligase | C5C18_04525 | Not Available | Negative | 983093 - 984751 | 59731.6 |
| hypothetical protein | C5C18_04530 | Not Available | Positive | 984844 - 985371 | 18231.3 |
| transglutaminase | C5C18_04535 | Not Available | Negative | 985423 - 986217 | 28320.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |