Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | C5C18_00390 | Not Available | Positive | 75769 - 76017 | 8868.39 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | C5C18_00395 | Not Available | Positive | 76095 - 77330 | 42878.8 |
| duf3145 domain-containing protein | C5C18_00400 | Not Available | Negative | 77405 - 77908 | 18317.7 |
| padr family transcriptional regulator | C5C18_00405 | Not Available | Positive | 77907 - 78737 | 29401.6 |
| hypothetical protein | C5C18_00410 | Not Available | Positive | 78748 - 80076 | 45992.7 |
| bifunctional 3'-5' exonuclease/dna polymerase | C5C18_00415 | Not Available | Negative | 80160 - 81764 | 56786.9 |
| hypothetical protein | C5C18_00420 | Not Available | Negative | 81851 - 82141 | 11001.2 |
| mfs transporter | C5C18_00425 | Not Available | Positive | 82558 - 83907 | 46135.4 |
| glycosyl transferase family 2 | C5C18_00430 | Not Available | Negative | 83934 - 84710 | 28667.1 |
| hypothetical protein | C5C18_00435 | Not Available | Positive | 84834 - 85466 | 24219.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |