Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_04440 | Not Available | Negative | 960798 - 961619 | 30000.0 |
| hypothetical protein | C5C18_04445 | Not Available | Negative | 961616 - 962878 | 45796.4 |
| hypothetical protein | C5C18_04450 | Not Available | Positive | 963051 - 964091 | 38191.4 |
| hypothetical protein | C5C18_04455 | Not Available | Positive | 964088 - 965143 | 38519.0 |
| lipopolysaccharide biosynthesis protein | C5C18_04460 | Not Available | Negative | 965183 - 966718 | 53956.5 |
| polysaccharide pyruvyl transferase family protein | C5C18_04465 | Not Available | Negative | 966625 - 967362 | 26626.7 |
| o-antigen ligase domain-containing protein | C5C18_04470 | Not Available | Positive | 967680 - 969023 | 47472.9 |
| hypothetical protein | C5C18_04475 | Not Available | Negative | 969051 - 971228 | 75236.6 |
| hypothetical protein | C5C18_04480 | Not Available | Negative | 971357 - 972604 | 44526.8 |
| peptide chain release factor n(5)-glutamine methyltransferase | C5C18_04485 | Not Available | Negative | 972678 - 973553 | 30765.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |