Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5C18_04390 | Not Available | Negative | 944877 - 946256 | 49076.5 |
| colanic acid exporter | C5C18_04395 | Not Available | Negative | 947042 - 950056 | 107765.0 |
| glycosyl transferase family 1 | C5C18_04400 | Not Available | Negative | 951150 - 952355 | 43071.2 |
| glycosyltransferase | C5C18_04405 | Not Available | Negative | 952342 - 953430 | 39607.7 |
| polypeptide n-acetylgalactosaminyltransferase | C5C18_04410 | Not Available | Negative | 953156 - 954031 | 31563.2 |
| hypothetical protein | C5C18_04415 | Not Available | Negative | 954028 - 955128 | 40622.8 |
| hypothetical protein | C5C18_04420 | Not Available | Negative | 955047 - 956114 | 37640.3 |
| hypothetical protein | C5C18_04425 | Not Available | Negative | 956111 - 957865 | 63262.7 |
| glucose-1-phosphate thymidylyltransferase | C5C18_04430 | Not Available | Positive | 958875 - 959759 | 32273.7 |
| dtdp-glucose 4,6-dehydratase | C5C18_04435 | Not Available | Positive | 959799 - 960791 | 36683.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |