Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit beta | C5C18_04340 | Not Available | Negative | 935144 - 936619 | 53453.4 |
| f0f1 atp synthase subunit gamma | C5C18_04345 | Not Available | Negative | 936683 - 937579 | 32860.9 |
| f0f1 atp synthase subunit alpha | C5C18_04350 | Not Available | Negative | 937627 - 939264 | 58671.9 |
| f0f1 atp synthase subunit delta | C5C18_04355 | Not Available | Negative | 939370 - 940164 | 27475.1 |
| f0f1 atp synthase subunit b | C5C18_04360 | Not Available | Negative | 940164 - 940706 | 19504.2 |
| atp synthase f0 subunit c | C5C18_04365 | Not Available | Negative | 940724 - 940960 | 7933.9 |
| atp synthase f0 subunit a | C5C18_04370 | Not Available | Negative | 941061 - 941864 | 29766.5 |
| hypothetical protein | C5C18_04375 | Not Available | Negative | 942122 - 942565 | 14854.9 |
| undecaprenyl/decaprenyl-phosphate alpha-n-acetylglucosaminyl 1-phosphate transferase | C5C18_04380 | Not Available | Negative | 942562 - 943800 | 44219.5 |
| threonylcarbamoyl-amp synthase | C5C18_04385 | Not Available | Negative | 943807 - 944817 | 34187.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |