Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | C5C18_04290 | Not Available | Negative | 924228 - 925106 | 29525.0 |
| carbamoyl phosphate synthase large subunit | C5C18_04295 | Not Available | Negative | 925106 - 928396 | 118193.0 |
| carbamoyl phosphate synthase small subunit | C5C18_04300 | Not Available | Negative | 928396 - 929676 | 45693.4 |
| lrp/asnc family transcriptional regulator | C5C18_04305 | Not Available | Positive | 929900 - 930379 | 17580.2 |
| aspartate aminotransferase family protein | C5C18_04310 | Not Available | Positive | 930383 - 931828 | 52786.5 |
| hypothetical protein | C5C18_04315 | Not Available | Negative | 931834 - 932703 | 29953.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | C5C18_04320 | Not Available | Positive | 932935 - 933429 | 17533.2 |
| dna-3-methyladenine glycosylase i | C5C18_04325 | Not Available | Positive | 933426 - 934019 | 21968.9 |
| peroxide stress protein yaaa | C5C18_04330 | Not Available | Negative | 934023 - 934775 | 27009.2 |
| f0f1 atp synthase subunit epsilon | C5C18_04335 | Not Available | Negative | 934878 - 935141 | 8963.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |