Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | C5C18_04240 | Not Available | Negative | 913772 - 914611 | 29887.9 |
| phosphoribosyl-atp diphosphatase | C5C18_04245 | Not Available | Negative | 914746 - 915009 | 9724.6 |
| ribulose-phosphate 3-epimerase | C5C18_04250 | Not Available | Negative | 915341 - 916009 | 24103.7 |
| methyltransferase | C5C18_04255 | Not Available | Negative | 916048 - 917421 | 47625.9 |
| methionyl-trna formyltransferase | C5C18_04260 | Not Available | Negative | 917418 - 918323 | 31048.6 |
| preprotein translocase subunit seca | C5C18_04265 | Not Available | Negative | 918341 - 920305 | 69236.3 |
| methionine adenosyltransferase | C5C18_04270 | Not Available | Negative | 920320 - 921525 | 42892.4 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | C5C18_04275 | Not Available | Negative | 921643 - 922869 | 42001.7 |
| dna-directed rna polymerase subunit omega | C5C18_04280 | Not Available | Negative | 922880 - 923134 | 9264.96 |
| guanylate kinase | C5C18_04285 | Not Available | Negative | 923258 - 924184 | 33724.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |