Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | C5C18_04190 | Not Available | Negative | 901492 - 902949 | 52662.6 |
| glutamate synthase large subunit | C5C18_04195 | Not Available | Negative | 902942 - 907534 | 166127.0 |
| prolipoprotein diacylglyceryl transferase | C5C18_04200 | Not Available | Negative | 907771 - 908730 | 35205.4 |
| tryptophan synthase subunit alpha | C5C18_04205 | Not Available | Negative | 908828 - 909628 | 27566.7 |
| tryptophan synthase subunit beta | C5C18_04210 | Not Available | Negative | 909625 - 910836 | 42931.0 |
| indole-3-glycerol phosphate synthase trpc | C5C18_04215 | Not Available | Negative | 910857 - 911630 | 27217.8 |
| hypothetical protein | C5C18_04220 | Not Available | Negative | 911630 - 911863 | 7936.61 |
| hypothetical protein | C5C18_04225 | Not Available | Negative | 912001 - 912636 | 21052.4 |
| phosphoribosyl-amp cyclohydrolase | C5C18_04230 | Not Available | Negative | 912633 - 913001 | 13499.9 |
| imidazole glycerol phosphate synthase subunit hisf | C5C18_04235 | Not Available | Negative | 912998 - 913759 | 26346.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |