Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4433 domain-containing protein | C5C18_04140 | Not Available | Positive | 890562 - 891548 | 35179.9 |
| hypothetical protein | C5C18_04145 | Not Available | Negative | 891556 - 892080 | 18812.7 |
| adenylate kinase | C5C18_04150 | Not Available | Positive | 892203 - 892769 | 20374.2 |
| card family transcriptional regulator | C5C18_04155 | Not Available | Negative | 892791 - 893279 | 17821.3 |
| tetr/acrr family transcriptional regulator | C5C18_04160 | Not Available | Negative | 893279 - 893962 | 23824.1 |
| duf2236 domain-containing protein | C5C18_04165 | Not Available | Negative | 894008 - 894745 | 26721.0 |
| atp-dependent helicase | C5C18_04170 | Not Available | Negative | 894926 - 897943 | 111145.0 |
| aldose 1-epimerase family protein | C5C18_04175 | Not Available | Positive | 898008 - 898892 | 32224.1 |
| exopolyphosphatase | C5C18_04180 | Not Available | Negative | 898871 - 899839 | 34108.1 |
| pyruvate kinase | C5C18_04185 | Not Available | Negative | 899951 - 901396 | 51634.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |