Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrb | C5C18_04090 | Not Available | Negative | 878633 - 880699 | 77342.3 |
| dephospho-coa kinase | C5C18_04095 | Not Available | Negative | 880931 - 881527 | 20962.0 |
| 30s ribosomal protein s1 | C5C18_04100 | Not Available | Negative | 881633 - 883087 | 53143.6 |
| duf885 domain-containing protein | C5C18_04105 | Not Available | Negative | 883336 - 885012 | 60623.4 |
| dna polymerase i | C5C18_04110 | Not Available | Negative | 885045 - 887714 | 97410.8 |
| thioesterase | C5C18_04115 | Not Available | Positive | 887884 - 888252 | 13097.8 |
| pyridoxal 5'-phosphate synthase | C5C18_04120 | Not Available | Positive | 888413 - 889084 | 24688.8 |
| Trna-leu | Not Available | Not Available | Positive | 889742 - 889827 | Not Available |
| antar domain-containing protein | C5C18_04125 | Not Available | Negative | 889094 - 889777 | 25156.5 |
| duf427 domain-containing protein | C5C18_04135 | Not Available | Negative | 890104 - 890595 | 17237.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |