Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly protein sufb | C5C18_03990 | Not Available | Negative | 854113 - 855531 | 52667.3 |
| hypothetical protein | C5C18_03995 | Not Available | Positive | 855905 - 856156 | 8956.18 |
| cytochrome oxidase assembly protein | C5C18_04000 | Not Available | Negative | 856101 - 857060 | 33810.9 |
| protoheme ix farnesyltransferase | C5C18_04005 | Not Available | Negative | 857060 - 857989 | 33401.7 |
| transketolase | C5C18_04010 | Not Available | Positive | 858308 - 860401 | 75100.9 |
| transaldolase | C5C18_04015 | Not Available | Positive | 860496 - 861617 | 39538.4 |
| glucose-6-phosphate isomerase | C5C18_04020 | Not Available | Positive | 861620 - 863233 | 55919.2 |
| glucose-6-phosphate dehydrogenase | C5C18_04025 | Not Available | Positive | 863409 - 864947 | 57469.1 |
| opca protein | C5C18_04030 | Not Available | Positive | 864944 - 865912 | 34268.4 |
| 6-phosphogluconolactonase | C5C18_04035 | Not Available | Positive | 866009 - 866776 | 27428.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |