Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp reductase | C5C18_03940 | Not Available | Negative | 846642 - 847352 | 24595.4 |
| duf3099 domain-containing protein | C5C18_03945 | Not Available | Positive | 847483 - 847824 | 11843.6 |
| hypothetical protein | C5C18_03950 | Not Available | Positive | 847824 - 848054 | 8596.33 |
| surf1 family protein | C5C18_03955 | Not Available | Positive | 848168 - 848935 | 27759.7 |
| abc transporter | C5C18_03960 | Not Available | Negative | 848908 - 850506 | 57616.9 |
| biotin transporter bioy | C5C18_03965 | Not Available | Positive | 850678 - 851307 | 21262.3 |
| metal-sulfur cluster assembly factor | C5C18_03970 | Not Available | Negative | 851381 - 851716 | 12394.8 |
| fe-s cluster assembly atpase sufc | C5C18_03975 | Not Available | Negative | 851716 - 852477 | 27453.8 |
| non-heme iron oxygenase ferredoxin subunit | C5C18_03980 | Not Available | Negative | 852478 - 852792 | 11040.0 |
| fe-s cluster assembly protein sufd | C5C18_03985 | Not Available | Negative | 852804 - 854042 | 43660.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |