Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
483422 bp
Thymine Count
478505 bp
Guanine Count
1110535 bp
Cytosine Count
1121259 bp
Genome Length
3193866 bp
Protein-coding Genes
2893 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | C5C18_03890 | Not Available | Negative | 836137 - 837219 | 40565.1 |
| alpha/beta hydrolase | C5C18_03895 | Not Available | Negative | 837216 - 838127 | 32339.3 |
| maltose alpha-d-glucosyltransferase | C5C18_03900 | Not Available | Positive | 838292 - 840007 | 65526.9 |
| 3'-5' exonuclease | C5C18_03905 | Not Available | Positive | 840067 - 840837 | 27389.1 |
| bacteriocin-protection protein, ydei/ompd-associated family | C5C18_03910 | Not Available | Negative | 840842 - 841414 | 21447.4 |
| type b 50s ribosomal protein l31 | C5C18_03915 | Not Available | Negative | 841574 - 841822 | 9223.88 |
| abc transporter atp-binding protein | C5C18_03920 | Not Available | Negative | 841982 - 842767 | 28353.8 |
| glycogen synthase | C5C18_03925 | Not Available | Negative | 842800 - 843981 | 42073.2 |
| glucose-1-phosphate adenylyltransferase | C5C18_03930 | Not Available | Positive | 844058 - 845317 | 45323.9 |
| phosphoserine phosphatase serb | C5C18_03935 | Not Available | Positive | 845377 - 846036 | 22559.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |